User contributions for Sulc

17 March 2014

• 17:4117:41, 17 March 2014 diff hist +3,795‎ N DNA model introduction ‎ Created page with "The model treats DNA as a string of rigid nucleotides, which interact through potentials which depend on the position and orientation of the nucleotides. The interactions are: #S…"
• 17:4017:40, 17 March 2014 diff hist +30‎ Main Page ‎No edit summary
• 17:3917:39, 17 March 2014 diff hist +6,067‎ N RNA model introduction ‎ Created page with "===Description of the oxRNA model=== The RNA model, oxRNA, treats each RNA nucleotide as a single rigid body with multiple interaction sites, following the coarse-graining approa…"
• 17:3817:38, 17 March 2014 diff hist −43‎ Features of the previous version ‎No edit summary
• 17:3717:37, 17 March 2014 diff hist +4‎ Publications ‎No edit summary
• 17:3617:36, 17 March 2014 diff hist +24‎ Main Page ‎No edit summary
• 17:3617:36, 17 March 2014 diff hist +2,778‎ N Previous version ‎ Created page with " In this section, we outline the procedure for compiling the previously released (2012) version of oxDNA simulation code. This version is no longer developed or supported, but th…"

11 March 2014

• 15:5115:51, 11 March 2014 diff hist 0‎ Model introduction ‎ →‎Simulation units
• 15:5015:50, 11 March 2014 diff hist 0‎ Model introduction ‎No edit summary
• 15:4115:41, 11 March 2014 diff hist +4‎ RNA duplex melting ‎ →‎Introduction
• 15:4115:41, 11 March 2014 diff hist 0‎ RNA duplex melting ‎ →‎Introduction
• 15:4115:41, 11 March 2014 diff hist 0‎ RNA duplex melting ‎No edit summary
• 15:4115:41, 11 March 2014 diff hist −46‎ RNA duplex melting ‎No edit summary
• 15:4015:40, 11 March 2014 diff hist +23‎ N File:Melting.png ‎ Melting of an RNA 8-mer current
• 15:2015:20, 11 March 2014 diff hist +6‎ RNA duplex melting ‎ →‎Introduction
• 15:1915:19, 11 March 2014 diff hist 0‎ RNA duplex melting ‎ →‎Introduction
• 15:1915:19, 11 March 2014 diff hist +112‎ RNA duplex melting ‎ →‎Introduction
• 14:5114:51, 11 March 2014 diff hist −1‎ RNA duplex melting ‎No edit summary
• 14:5114:51, 11 March 2014 diff hist +26‎ RNA duplex melting ‎ →‎Introduction
• 14:5014:50, 11 March 2014 diff hist 0‎ N File:Arrow.png ‎No edit summary current
• 14:4714:47, 11 March 2014 diff hist 0‎ RNA duplex melting ‎No edit summary
• 14:4714:47, 11 March 2014 diff hist +33‎ RNA duplex melting ‎No edit summary
• 14:4614:46, 11 March 2014 diff hist +2‎ RNA duplex melting ‎ →‎Introduction
• 14:4614:46, 11 March 2014 diff hist +17‎ RNA duplex melting ‎ →‎Introduction
• 14:4514:45, 11 March 2014 diff hist +30‎ N File:RNA8M.png ‎ An image of a melted RNA 8-mer current
• 14:4414:44, 11 March 2014 diff hist +18‎ N File:RNA8D.png ‎ A formed RNA 8-mer current
• 14:3614:36, 11 March 2014 diff hist +37‎ N File:Image 8.png ‎ A formed RNA duplex with 8 base pairs current
• 14:3514:35, 11 March 2014 diff hist +30‎ N File:Image melt.png ‎ An image of a melted RNA 8-mer current
• 14:2414:24, 11 March 2014 diff hist +1‎ RNA duplex melting ‎ →‎Data evaluation and estimation of the melting temperature
• 14:2414:24, 11 March 2014 diff hist +7‎ RNA duplex melting ‎ →‎Data evaluation and estimation of the melting temperature
• 14:2314:23, 11 March 2014 diff hist +5‎ RNA duplex melting ‎ →‎Data evaluation and estimation of the melting temperature
• 14:1914:19, 11 March 2014 diff hist +1‎ RNA duplex melting ‎ →‎Data evaluation and estimation of the melting temperature
• 14:1914:19, 11 March 2014 diff hist −8‎ RNA duplex melting ‎ →‎Data evaluation and estimation of the melting temperature
• 14:1814:18, 11 March 2014 diff hist +6‎ RNA duplex melting ‎ →‎Data evaluation and estimation of the melting temperature
• 14:1814:18, 11 March 2014 diff hist −15‎ RNA duplex melting ‎ →‎Data evaluation and estimation of the melting temperature
• 14:1814:18, 11 March 2014 diff hist +133‎ RNA duplex melting ‎ →‎Data evaluation and estimation of the melting temperature
• 14:1614:16, 11 March 2014 diff hist +2‎ RNA duplex melting ‎ →‎Data evaluation and estimation of the melting temperature
• 14:1514:15, 11 March 2014 diff hist +1‎ RNA duplex melting ‎ →‎Setting the order parameters and weights
• 14:1314:13, 11 March 2014 diff hist +286‎ RNA duplex melting ‎No edit summary
• 13:5913:59, 11 March 2014 diff hist +2‎ RNA model ‎ →‎Running simulation with the oxRNA model
• 13:1113:11, 11 March 2014 diff hist 0‎ RNA model ‎ →‎Running simulation with the oxRNA model
• 13:1013:10, 11 March 2014 diff hist +277‎ RNA model ‎No edit summary
• 12:5712:57, 11 March 2014 diff hist +501‎ RNA duplex melting ‎No edit summary
• 12:5112:51, 11 March 2014 diff hist +62‎ RNA duplex melting ‎No edit summary
• 12:5012:50, 11 March 2014 diff hist +1,067‎ RNA duplex melting ‎No edit summary
• 12:1612:16, 11 March 2014 diff hist +858‎ RNA duplex melting ‎No edit summary
• 12:0112:01, 11 March 2014 diff hist +2,224‎ RNA duplex melting ‎No edit summary

10 March 2014

• 19:1119:11, 10 March 2014 diff hist +9‎ RNA duplex melting ‎No edit summary
• 18:5718:57, 10 March 2014 diff hist +2,548‎ RNA duplex melting ‎No edit summary
• 18:0918:09, 10 March 2014 diff hist −3‎ RNA model ‎No edit summary