Screenshots and movies
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single-stranded DNA
double-stranded DNA
Plectoneme formation
See also the following movies:
DNA cage
DNA tetrahedron (double sides)
DNA tetrahedron
DNA tile
Formation of a duplex in the simulation box
Strand displacement
Invading strand attached by toehold
Invading and victim strands that are not coaxially stacked
Invading and victim strands that are coaxially stacked
A movie of part of the strand displacement process. It shows the invading strand attached by toehold and then displacing several base pairs of the victim strand:
DX tile
Kissing hairpin
